Now published: We trained a chemical language model that works with both small molecules and peptides. Ideal for making predictions on peptides with non-standard amino acids or other chemical modifications.
https://pubs.acs.org/doi/full/10.1021/acs.jcim.4c01441

Despite the title which suggests this is particularly for predicting membrane diffusion, the model is general and can be fine-tuned to any downstream application you may be interested in.

If you don't have access to the journal pub, the bioRxiv version is here:

Computational biologist, data scientist, digital artist | 
https://clauswilke.art/links | Hosting /ai-art & /clauswilke

Despite the title which suggests this is particularly for predicting membrane diffusion, the model is general and can be fine-tuned to any downstream application you may be interested in.

If you don't have access to the journal pub, the bioRxiv version is here: https://www.biorxiv.org/content/10.1101/2024.08.09.607221v2.abstract